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Class: TemplateSequence

Represents a sequence that is part of a template, where the actual sequence content will be determined by the user's actions

URI: opencloning_linkml:TemplateSequence

classDiagram class TemplateSequence click TemplateSequence href "../TemplateSequence" Sequence <|-- TemplateSequence click Sequence href "../Sequence" TemplateSequence : circular TemplateSequence : id TemplateSequence : primer_design TemplateSequence : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
circular 0..1
Boolean		 Whether the sequence is circular or linear direct
primer_design 0..1
String		 Can be used to indicate the intended primer design for this sequence in the t... direct
id 1
Integer		 A unique identifier for a thing Sequence, NamedThing
type 0..1
String		 Designates the class Sequence

Identifier and Mapping Information

Schema Source

  • from schema: https://opencloning.github.io/OpenCloning_LinkML

Mappings

Mapping Type Mapped Value
self opencloning_linkml:TemplateSequence
native opencloning_linkml:TemplateSequence

LinkML Source

Direct

name: TemplateSequence
description: Represents a sequence that is part of a template, where the actual sequence
  content will be determined by the user's actions
from_schema: https://opencloning.github.io/OpenCloning_LinkML
is_a: Sequence
attributes:
  circular:
    name: circular
    description: Whether the sequence is circular or linear
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    domain_of:
    - TemplateSequence
    - ManuallyTypedSource
    - AssemblySource
    range: boolean
    required: false
  primer_design:
    name: primer_design
    description: Can be used to indicate the intended primer design for this sequence
      in the template
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    domain_of:
    - TemplateSequence
    range: string
    required: false

Induced

name: TemplateSequence
description: Represents a sequence that is part of a template, where the actual sequence
  content will be determined by the user's actions
from_schema: https://opencloning.github.io/OpenCloning_LinkML
is_a: Sequence
attributes:
  circular:
    name: circular
    description: Whether the sequence is circular or linear
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    alias: circular
    owner: TemplateSequence
    domain_of:
    - TemplateSequence
    - ManuallyTypedSource
    - AssemblySource
    range: boolean
    required: false
  primer_design:
    name: primer_design
    description: Can be used to indicate the intended primer design for this sequence
      in the template
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    alias: primer_design
    owner: TemplateSequence
    domain_of:
    - TemplateSequence
    range: string
    required: false
  id:
    name: id
    description: A unique identifier for a thing
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    slot_uri: schema:identifier
    identifier: true
    alias: id
    owner: TemplateSequence
    domain_of:
    - NamedThing
    - Sequence
    range: integer
    required: true
  type:
    name: type
    description: Designates the class
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    designates_type: true
    alias: type
    owner: TemplateSequence
    domain_of:
    - Sequence
    - Source
    - CollectionOptionInfo
    - AnnotationReport
    - AssociatedFile
    range: string