Class: AssociatedFile

Represents a file associated with a sequence

classDiagram class AssociatedFile click AssociatedFile href "../AssociatedFile" AssociatedFile <|-- SequencingFile click SequencingFile href "../SequencingFile" AssociatedFile : file_name AssociatedFile : file_type AssociatedFile --> "1" AssociatedFileType : file_type click AssociatedFileType href "../AssociatedFileType" AssociatedFile : sequence_id AssociatedFile --> "1" Sequence : sequence_id click Sequence href "../Sequence" AssociatedFile : type

Inheritance

AssociatedFile
- SequencingFile

Slots

Name	Cardinality and Range	Description	Inheritance
type	0..1 String	Designates the class	direct
sequence_id	1 Sequence	The sequence this file is associated with	direct
file_name	1 String	The name of the file	direct
file_type	1 AssociatedFileType	The type of file	direct

Usages

used by	used in	type	used
CloningStrategy	files	range	AssociatedFile

Identifier and Mapping Information

Schema Source

from schema: https://opencloning.github.io/OpenCloning_LinkML

Mappings

Mapping Type	Mapped Value
self	opencloning_linkml:AssociatedFile
native	opencloning_linkml:AssociatedFile

LinkML Source

Direct

name: AssociatedFile
description: Represents a file associated with a sequence
from_schema: https://opencloning.github.io/OpenCloning_LinkML
slots:
- type
attributes:
  sequence_id:
    name: sequence_id
    description: The sequence this file is associated with
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    domain_of:
    - AssociatedFile
    range: Sequence
    required: true
  file_name:
    name: file_name
    description: The name of the file
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    domain_of:
    - UploadedFileSource
    - AssociatedFile
    range: string
    required: true
  file_type:
    name: file_type
    description: The type of file
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    domain_of:
    - AssociatedFile
    range: AssociatedFileType
    required: true

Induced

name: AssociatedFile
description: Represents a file associated with a sequence
from_schema: https://opencloning.github.io/OpenCloning_LinkML
attributes:
  sequence_id:
    name: sequence_id
    description: The sequence this file is associated with
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    alias: sequence_id
    owner: AssociatedFile
    domain_of:
    - AssociatedFile
    range: Sequence
    required: true
  file_name:
    name: file_name
    description: The name of the file
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    alias: file_name
    owner: AssociatedFile
    domain_of:
    - UploadedFileSource
    - AssociatedFile
    range: string
    required: true
  file_type:
    name: file_type
    description: The type of file
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    alias: file_type
    owner: AssociatedFile
    domain_of:
    - AssociatedFile
    range: AssociatedFileType
    required: true
  type:
    name: type
    description: Designates the class
    from_schema: https://opencloning.github.io/OpenCloning_LinkML
    rank: 1000
    designates_type: true
    alias: type
    owner: AssociatedFile
    domain_of:
    - Sequence
    - Source
    - CollectionOptionInfo
    - AnnotationReport
    - AssociatedFile
    range: string